All addresses below are assumed to be prefixed by https://taxonomy.jgi-psf.org, e.g. /name/homo_sapiens implies a full URL of:
- https://taxonomy.jgi-psf.org/name/homo_sapiens
For a simplified taxonomic tree, add "simple". This will ignore unranked or uncommon levels like tribe and parvorder, and only display the following levels: SUBSPECIES, SPECIES, GENUS, FAMILY, ORDER, CLASS, PHYLUM, KINGDOM, SUPERKINGDOM, DOMAIN For example:
- /simple/id/1234
To print taxonomy from the command line in Linux, use curl:
- curl https://taxonomy.jgi-psf.org/id/9606
Queries longer than around 8kB can be sent via POST: curl https://taxonomy.jgi-psf.org/POST...where the data sent is, for example:
- name/e.coli,h.sapiens,c.lupus